Regan
A few things to consider (which you may have already thought of)
Keep the EBB centred within the bottom bracket. It is easy to push it sideways and that messes with the chain line.
Rotate the pedals several times and check for tight spots throughout all of the pedal rotation before tightening the grub screws.
Make sure the indentations the grub screws put in the EBB are far enough apart so they are distinct indentations. If they are too close then they become a grove in the EBB and don’t hold as well. Use a small torch / flash light to look down the grub screw holes.
I was a bit too gentle with the grub screws on my first adjustment and the screws became loose. Luckily I found out before they fell out altogether and lost one of them. Check that they are not working loose for a little while after making the adjustment.
Tightening one of the grub screws will make the other looser. You need to tighten one, then the other, then back to the first, then back to the second, then back to the first and so on until you are happy with how tight they both are.
If you are particular about the height of your saddle you may want to adjust is after adjusting the EBB as it moves your pedals a bit.
Peter